Corresponding, * leading

icon 2021

Okimune, K., Hataya, S., Matsumoto, K., Ushirogata, K., Banko, P., Takeda, S., Takasuka, T.E. (2021) "Histone chaperone-mediated co-expression assembly of tetrasomes and nucleosomes." FEBS open bio, DOI:10.1002/2211-5463.13311.

Ohashi, K., Hataya, S., Nakata, A., Matsumoto, K., Kato, N., Sato, W., Carlos-Shanley, C., Beebe, E.T., Currie, C.R., Fox, B.G., Takasuka, T.E. (2021) "Mannose and mannobiose specific responses of insect associated cellulolytic Streptomyces." Appl. Environ. Microbiol., DOI:10.1128/AEM.02719-20.

Endo, Y., Takemori, N., Nagy, S.K., Okimune, K., Rohinton, K., Onouchi, H., Takasuka, T.E. (2021) "De novo reconstitution of chromatin using wheat germ cell-free protein syntehsis. FEBS open bio, DOI:10.1002/2211-5463.13178.

icon 2020

Hori, C., Song, R., Matsumoto, K., Matsumoto, R., Minkoff, B.B., Oita, S., Hara, H., Takasuka, T.E. (2020) "Proteomic characterization of lignocellulolytic enzymes secreted by the insect-associated fungus, Daldinia decipiens oita, isolated from the forest in northern Japan" Appl. Environ. Microbiol., DOI:10.1128/AEM.02350-19.

Glasgow, E.M., Kemna, E.I., Bingman, C.A., Ing, N.L., Deng, K., Bianchetti, C.M., Takasuka, T.E., Northen, T.R., Fox, B.G. (2020) "A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunitites for biomass hydrolysis" J Biol. Chem. DOI:10.1074/jbc.RA120.015328.

Okimune, K., Nagy, S.K., Hataya, S., Endo, Y., Takasuka, T.E. (2020) "Reconstitution of Drosophila and human chromatins by wheat germ cell-free co-expression system" BMC Biotechnol., DOI:10.1186/s12896-020-00655-6.

Yoshinari, A., Hosokawa, T., Beier, M.P., Oshima, K., Ogino, Y., Hori, C., Takasuka, T.E., Fukao, Y., Fujiwara, T., Takano J. (2020) "Transport-coupled ubiquitination of the borate transporter BOR1 for its boron-dependent degradation." The Plant cell, DOI:10.1093/plcell/koaa020.

icon 2019

Anabuki, T., Ito, Y., Ohashi, K., Takasuka, T.E., Matsuura, H., Takahashi, K. (2019) "Identification of recombinant AtPYL2, an abscisic acid receptor, in E. coli using a substrate-derived bioactive small molecule, a biotin linker with alkyne and amino groups, and a protein cross-linker" Bioorg. Med. Chem. Lett., DOI:10.1016/j.bmcl.2019.126634.

Watanabe, T., Kojima, H., Umezawa, K., Hori, C., Takasuka, T.E., Kato, Y., Fukui, M. (2019) "Genomes of neutrophilic sulfur-oxidizing chemolithoautotrophs representing 9 proteobacterial species from 8 genera" Front. Microbiol., DOI:10.3389/fmicb.2019.00316.

Glasgow, E.M., Vander Meulen, K.A., Takasuka, T.E., Bianchetti, C.M., Bergeman, L.F., Deutsch, S., Fox, B.G. (2019) "Extent and origins of functional diversity in a subfamily of glycoside hydrolases" J. Mol. Biol., DOI:10.1016/j.jmb.2019.01.024.

icon 2018

Terashima, M., Ohashi, K., Takasuka, T.E., Kojima, H. Fukui, M. (2018) "Antarctic heterotrophic bacterium Hymenobacter nivis P3T displays light-enhanced growth and expresses putative photoactive proteins" Environ Microbiol Rep., DOI:10.1111/1758-2229.

icon 2017

大橋慧介, 堀千明, 高須賀太一 (2017) "Determination, functional characterization, and structural study of wood devastating insect symbionts for biorefinery" SEIKAGAKU minireview, DOI:10.14952/SEIKAGAKU.2017.890739.

Cheng, N., Koda, K., Tamai, Y., Yamamoto, Y., Takasuka, T.E., Uraki, Y. (2017) "Optimization of simultaneous saccharification and fermentation conditions with amphipathic lignin derivatives for concentrated bioethanol production." Bioresources. Technol., DOI:May;232:126-132.

icon 2016

Book, A.J., Lewin, G.R., McDonald, B.R., Takasuka, T.E., Wendt-Pienkowski, E., Doering, D.T., Suh, S., Raffa, K.F., Fox, B.G., Currie, C.R. (2016) "Evolution of High Cellulolytic Activity in Symbiotic Streptomyces through Selction of Expanded Gene Content and Coordinated Gene Expression." PLoS Biology, DOI:10.137/journal.pbio.1002475

Takasuka, T, Hori, C., Ellinger, J.J.,Tobimatsu, Y. (2016) “Lignocellulose degradation by insect-symbiont microbes” Chemistry and Biology, 54(4), 156-158. (invited book chapter)

icon 2015

Walker, J.A.*, Takasuka, T.E.*, Deng, K., Bianchetti, C.M., Udell, H.S., Prom, B.M., Kim, H., Northen, T.R., and Fox, B.G. (2015) “Multifunctional cellulase catalysis targeted by fusion to different carbohydrate binding modules.” Biotechnol. Biofuels., 8, 220

Deng, K., Takasuka, T.E., Bianchetti, C.M., Bergeman, L.F., Adams, P.D., Northen, T.R., and Fox, B.G. (2015) “Use of Nanostructure-initiator Mass Spectrometry to Deduce Selectivity of Reaction in Glycoside Hydrolases.” Front. Bioeng. Biotenchol., 3, 165

Deng, K., Guenther, J.M., Gao, J., Bowen, B.P., Tran, H., Reyes-Ortiz, V., Cheng, X., Sathitsuksanoh, N., Heins, R., Takasuka, T.E., Bergeman, L.F., Geertz-Hansen, H., Deutsch, S., Loque, D., Sale, K.L., Simmons, B.A., Adams, P.D., Singh, A.K., Fox, B.G., and Northen, T.R. (2015) “Development of a High Throughput Platform for Screening Glycoside Hydrolases Based on Oxime-NIMS.” Front. Bioeng. Biotenchol., 3, 153

Bianchetti, C.M.*, Takasuka, T.E.*, Udell, SH., Yik, E, Bergeman, L.F., Deutsch, S., and Fox, B.G. (2015) “Active site and laminarin binding in glycoside hydrolase family 55” J. Biol Chem., pii: jbc.M114.623579

icon 2014

Book, A.J., Lewin, G.R., McDonald B.R., Takasuka, T.E., Doering, D.T., Adams, A.S., Blodgett, J.A.V., Clardy, J., Raffa, K.F., Fox , B.G., and Currie, C.R. (2014) “Cellulolytic Streptomyces strains associated with herbivorous insects share a phylogenetically-linked capacity for the degradation of lignocellulose” Appl. Environ. Microbiol., 80(15):4692-701.

Takasuka, T.E.*, Walker, J.A., Bergeman, L.F., Vander Meulen, K.A., Makino, S.I., Elsen, N.L., Fox, B.G. (2014) “Cell-free translation of biofuels enzymes.” Methods. Mol. Biol., DOI:10.1007/978-1-62703-782-2_5

Book A.J.*, Yannamalli, R.M.*, Takasuka, T.E.*, Currie, C.R., Phillips, G.N.Jr., and Fox, B.G. (2014) “Evolution of substrate specificity in bacterial AA10 lytic polysaccharide monooxygenases” Biotechnol Biofuels., DOI:10.1186/1754-6834-7-109. eCollection 2014.

Deng, K., Takasuka, T.E., Heins, R., Cheng, X., Bergeman, L.F., Shi, J., Achenbrener, R., Deutsch, S., Singh, S., Sale, K.L., Simmons, B.A., Adams, P.D., Singh, A.K., Fox, B.G., and Northen, T.R. (2014) “Rapid Kinetic Characterization of Glycosyl Hydrolases Based on Oxime Derivatization and Nanostructure-Initiator Mass Spectrometry (NIMS)” ACS Chem. Biol., DOI:10.1021/cb5000289. Epub 2014 May 12.

Takasuka, T.E.*, Acheson, J.F, Bianchetti, C.M., Prom, B.M., Bergeman, L.F, Book, A.J, Currie, C.R., and Fox, B.G. (2014) “Atomic resolution structure and biochemical properties of a proteolytically processed β-mannanase from cellulolytic Streptomyces sp. SirexAA-E” PLoS One 9, e94166

Takasuka, T.E.*, Hsieh, Y.J., and Stein, A. (2014) “Miniaturized sequencing gel analysis for DNA footprinting” Appl. Biochem. Biotechnol., 172, 1-8

icon 2013

Takasuka, T.E.*, Bianchetti, C.M.*, Tobimatsu, Y., Bergeman, L.F, Ralph, J., and Fox, B.G. (2013) “Structure and function of abundantly secreted chitosanase SACTE_5457 from Streptomyces sp. SirexAA-E.” Proteins: Str. Func. And Bioinfo., DOI: 10.1002/prot.24491

Bianchetti, C.M., Harmann, C.H., Takasuka, T.E., Hura, G.L., Dyer,K, and Fox, B.G. (2013) “Fusion of Dioxygenase and Carbohydrate-Binding Module in a Novel Secreted Caffeoyl-CoA Dioxygenase from Cellulolytic Streptomyces sp. SirexAA-E” J. Biol. Chem., 288 18574-18587

Chandrasekaran, A. Deng, K., Koh, C.Y., Takasuka, T., Bergeman, L.F., Fox, B.G., Adams, P, and Singh, A.K. (2013) “A universal flow cytometry assay for screening carbohydrate-active enzymes using glycan microspheres.” ChemComm., 49, 5441-5443

Takasuka, T.E.*, Book, A.J., Lewin, G.R., Currie, C.R., and Fox, B.G. (2013) “Aerobic deconstruction of cellulosic biomass by an insect-associated Streptomyces.” Sci. Rep., 3, 1030

icon 2011

Riederer, A., Takasuka, T.E., Makino, S., Stevenson, D.M., Bukhman, Y., Elsen, N.L., and Fox, B.G. (2011) “Global gene expression patterns in Clostridium thermocellum from microarray analysis of chemostat culture on cellulose or cellobiose.” Appl. Environ. Microbiol., 77, 1243-1253

icon 2010

Miller, A., Chen, J., Takasuka, T.E., Kaufman, P.D., Jacobi, J.L., Irudayaraj, J.M.K., and Kirchmaier, A.L. (2010) “Proliferating cell nuclear antigen (PCNA) is required for cell- cycle regulated silent chromatin on replicated and nonreplicated genes.” J Biol. Chem., 285, 35142-35154

Takasuka, T.E.*, and Stein, A. (2010) “Direct measurements of the nucleosome-forming preferences of periodic DNA motifs challenge established models.” Nucl. Acids. Res., 38, 5672-5680

Stein, A., Takasuka, T.E., and Collings, C.K. (2010) “Are nucleosome positions in vivo primarily determined by histone-DNA sequence preferences?” Nucl. Acids. Res., 38, 709-719

icon 2008

Takasuka, T.E.*, Cioffi, A., and Stein, A. (2008) “Sequence information encoded in DNA that may influence long-range chromatin structure correlates with human chromosome functions.” PLoS One, 3 e2643

icon Others

Takasuka, T. (2019) "Introduction of my laboratory" SEIKAGAKU, 6, 829-730

Nagy, S.K., Banko, P., Tar, A., Bendali, K., Meszaros, T., Takasuka, T.E. (2021) "Human chromatin reconstitution by cell-free translation for epigenetic modifier enzyme assays." FEBS openbio, 11 77-78.

Ravankar, R.A., Imai, S., Shimamura, M., Chiba G. and Takasuka, T.E. (2017) “Problem-based learning and problem finding among university graduate students.” Jounal of Higher Education and Lifelong Learning, 24 9-20

Imai, S., Ravankar, R.A., Shimamura, M., Takasuka, T.E., Chiba G. and Yamanaka, Y. (2017) “Effect of instructor's actions and attitudes on student's motivation and discussion process in TBL class for graduate students.” International Jounal of Institutional Research and Management, 1 17-35